How do you deduct $x amount from an employees final wages, when terminating their employment. A written agreement was made to pay this back if they left within 6mths.

You always have an option to add a deduction to your employee’s final pay run, aussie-ness.

Here’s how:

1. Go to your pay run and click the employee involved. 
2. Select the Action button and select Terminate Employee. 
3. Click Save on the prompt 
4. The system will display earnings, accrued leave and termination payments will be calculated for the employee.
5. Click Actions and select Make a Deduction. 
6. Enter the deduction details and review everything. 
7. Click Finalise Pay Run.   

Please check this out for additional details: Terminating an Employee. 

Stay around if you have other questions.