I'll share insight on your query about entering multiple GSTN in your QuickBooks Online (QBO) company.
You can add a new tax agency in the Tax Centre page. It will allow you to enter a different GSTN. Be advised, I suggest you avoid entering multiple GSTNs in your QBO company. This allows you to avoid issues during a tax audit.
If you wish to proceed, follow these steps:
Go to the Taxes tab.
Click the Add tax button.
Select Custom tax.
Type in the appropriate information on the required fields.
When done, press Save.
You can refer to this article: GST reports in QuickBooks. It lists GST related reports found in QBO, along with a short description of each.
Feel free to leave a comment below if you have any other questions. I'll be sure to get back to you.
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