how do you deal with Undeposited Funds that have already been deposited as a bulk transaction? They still show up as Undeposited and AR.

@ron-kirsch  If you used Undeposited Funds in a bulk deposit, then the amount in question will be removed from undeposited funds.

It sounds like either the deposit was not entered correctly, or there's a duplicate in your Undeposited Funds.

Can you elaborate on the original entries involved?

RE: They still show up as Undeposited and AR.

Depositing the payments won't change their accounting. They will always use the Undeposited Funds account and the A/R account.

If the payments are still waiting to be deposited when you create a new deposit, then there's an issue. If not, then there's nothing wrong.